Overview

IDAllelesLocationGenome BuildSource
rs10761659A/Gchr10: 6268580438dbsnp146
rs10761659A/G chr10: 64445564 37dbsnp146_grch37
imm_10_64115570A/G chr10: 62685804 38ImmunoChip
imm_10_64115570A/G chr10: 64445564 37ImmunoChip
imm_10_64115570A/G chr10: 64115570 36ImmunoChip

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Historical Ids

Old Marker IDNew Marker IDCurrent Marker IDdbSNP Build
rs17631183rs10761659rs10761659123
rs118193354rs10761659rs10761659138
rs58577067rs10761659rs10761659130
rs56579973rs10761659rs10761659130

Criteria

rs10761659 meets the following criteria:

Criteria Name
Details
Disease Tags
Marker is GW-Significant in a Study 
Marker is an index SNP in a Region 

Functional Information

Gene function properties for rs10761659 as derived from dbSNP:

    Study

    Studies containing regions of association that span this marker are shown below. Please note that when making comparisons across studies, that they may vary in terms of size, genotyping platform, and exclusion criteria. If the 'Odds Ratio' is less than 1 then the region is protective (alleles are marked as blue) otherwise it is susceptible (alleles marked as red).

    StudyPublicationDiseaseRegionMarkerAllelesP-valueORMAFGene(s)

    Populations

    Populations data from Ensembl 1000 Genome data release May 2013:

    Linkage Disequilibrium Statistics

    LD Search Options

    Linkage disequilibrium (LD) statistics are calculated for rs10761659, using the 1000 genomes data release May 2013. Calculations are performed with the snpStats R library, covering 1Mb either side of the marker; and with the following filters applied: MAF > 0.01, call rate < 0.9, and chi-squared test for deviation from HWE > 25.