Overview

IDAllelesLocationGenome BuildSource
rs11755724A/Gchr6: 711875738dbsnp146
rs11755724A/G chr6: 7118990 37dbsnp146_grch37
rs11755724T/C chr6: 7118757 38ImmunoChip
rs11755724T/C chr6: 7118990 37ImmunoChip
rs11755724T/C chr6: 7063989 36ImmunoChip

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Historical Ids

Old Marker IDNew Marker IDCurrent Marker IDdbSNP Build
rs17603551rs11755724rs11755724123
rs60224885rs11755724rs11755724130

Criteria

No results found

Functional Information

Gene function properties for rs11755724 as derived from dbSNP:
  • in intron
Gene(s) at location of variation:  RREB1 

Study

Studies containing regions of association that span this marker are shown below. Please note that when making comparisons across studies, that they may vary in terms of size, genotyping platform, and exclusion criteria. If the 'Odds Ratio' is less than 1 then the region is protective (alleles are marked as blue) otherwise it is susceptible (alleles marked as red).

StudyPublicationDiseaseRegionMarkerAllelesP-valueORMAFGene(s)

Populations

Populations data from Ensembl 1000 Genome data release May 2013:

Linkage Disequilibrium Statistics

LD Search Options

Linkage disequilibrium (LD) statistics are calculated for rs11755724, using the 1000 genomes data release May 2013. Calculations are performed with the snpStats R library, covering 1Mb either side of the marker; and with the following filters applied: MAF > 0.01, call rate < 0.9, and chi-squared test for deviation from HWE > 25.