Overview

IDAllelesLocationGenome BuildSource
rs1734907A/Gchr7: 10071789438dbsnp146
rs1734907A/G chr7: 100315517 37dbsnp146_grch37
rs1734907A/G chr7: 100717894 38ImmunoChip
rs1734907A/G chr7: 100315517 37ImmunoChip
rs1734907A/G chr7: 100153453 36ImmunoChip

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Historical Ids

Old Marker IDNew Marker IDCurrent Marker IDdbSNP Build
rs10385352rs1734907rs1734907120
rs112846459rs1734907rs1734907142
rs386543454rs1734907rs1734907142
rs58881182rs1734907rs1734907130
rs11505707rs1734907rs1734907121

Criteria

rs1734907 meets the following criteria:

Criteria Name
Details
Disease Tags
Marker is an index SNP in a Region 
Marker is GW-Significant in a Study 

Functional Information

Gene function properties for rs1734907 as derived from dbSNP:

    Study

    Studies containing regions of association that span this marker are shown below. Please note that when making comparisons across studies, that they may vary in terms of size, genotyping platform, and exclusion criteria. If the 'Odds Ratio' is less than 1 then the region is protective (alleles are marked as blue) otherwise it is susceptible (alleles marked as red).

    StudyPublicationDiseaseRegionMarkerAllelesP-valueORMAFGene(s)

    Populations

    Populations data from Ensembl 1000 Genome data release May 2013:

    Linkage Disequilibrium Statistics

    LD Search Options

    Linkage disequilibrium (LD) statistics are calculated for rs1734907, using the 1000 genomes data release May 2013. Calculations are performed with the snpStats R library, covering 1Mb either side of the marker; and with the following filters applied: MAF > 0.01, call rate < 0.9, and chi-squared test for deviation from HWE > 25.