Overview

IDAllelesLocationGenome BuildSource
rs354033G/Achr7: 14959237338dbsnp146
rs354033G/A chr7: 149289464 37dbsnp146_grch37
rs354033T/C chr7: 149592373 38ImmunoChip
rs354033T/C chr7: 149289464 37ImmunoChip
rs354033T/C chr7: 148920397 36ImmunoChip

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Historical Ids

Old Marker IDNew Marker IDCurrent Marker IDdbSNP Build
rs386583590rs354033rs354033142
rs58893249rs354033rs354033130

Criteria

rs354033 meets the following criteria:

Criteria Name
Details
Disease Tags
Marker is GW-Significant in a Study 
Marker is an index SNP in a Region 

Functional Information

Gene function properties for rs354033 as derived from dbSNP:
  • in intron
Gene(s) at location of variation:  ZNF767P 

Study

Studies containing regions of association that span this marker are shown below. Please note that when making comparisons across studies, that they may vary in terms of size, genotyping platform, and exclusion criteria. If the 'Odds Ratio' is less than 1 then the region is protective (alleles are marked as blue) otherwise it is susceptible (alleles marked as red).

StudyPublicationDiseaseRegionMarkerAllelesP-valueORMAFGene(s)

Populations

Populations data from Ensembl 1000 Genome data release May 2013:

Linkage Disequilibrium Statistics

LD Search Options

Linkage disequilibrium (LD) statistics are calculated for rs354033, using the 1000 genomes data release May 2013. Calculations are performed with the snpStats R library, covering 1Mb either side of the marker; and with the following filters applied: MAF > 0.01, call rate < 0.9, and chi-squared test for deviation from HWE > 25.